genewise output
Score 142.21 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00002003_2.0    4 GYEPRYQDLASTVKDEFPEAEVSGFVGRS                     
                     GYEPRY++LA  VKDEFP+AEVSGFVGR                      
                     GYEPRYRELAHVVKDEFPDAEVSGFVGRR                     
OMLM01020360.1-50526 gtgcctcgcgcggaggtcggggtgtggaa                     
                     gaacgagatcattaaatcacatcgttggg                     
                     acacctggctccggcgtttgagtccgaaa                     


SPP00002003_2.0   33                           SFEIQINGQLVFSKLELGGFPYE 
                                               SFEI+INGQL+FSKLE GGFPYE 
                               G:S[agc]        SFEIEINGQLIFSKLETGGFPYE 
OMLM01020360.1-50439 AGTAAGTA  Intron 1   CAGGCatgagaagccattacgaggtctg 
                      <1-----[50438:50303]-1>  gtatatagatttcatacggtcaa 
                                               ctgaactggccccgtgttctatg 


SPP00002003_2.0   57 DD                       VLNAVQNAHDGKPVQKITKSRAPC 
                     DD                       +LNA+Q AHDGKPV KITK+RAPC 
                     DD                       ILNAIQQAHDGKPVPKITKARAPC 
OMLM01020360.1-50231 ggGTGAGTA  Intron 2   CAGatagaccgcggacgcaaaagcgct 
                     aa<0-----[50225:50081]-0>ttactaacaagactcatcacgccg 
                     tc                       cgcatggttcgatgggccactaac 


SPP00002003_2.0   83 VIM                                               
                     VIM                                               
                     VIM                                               
OMLM01020360.1-50008 gaa                                               
                     ttt                                               
                     ctg                                               


//
Making a S in phase 1 intron
>OMLM01020360.1:subseq(13285,58428).pep
GYEPRYRELAHVVKDEFPDAEVSGFVGRRSSFEIEINGQLIFSKLETGGFPYEDDILNAI
QQAHDGKPVPKITKARAPCVIM
//
>OMLM01020360.1:subseq(13285,58428).[50526:49998].sp
GGATACGAACCCCGCTATCGGGAGCTCGCTCACGTCGTGAAGGACGAGTTTCCTGATGCG
GAAGTGTCTGGCTTCGTGGGAAGAAGAAGCAGCTTTGAGATAGAAATCAATGGGCAGCTC
ATCTTCTCCAAGCTTGAGACTGGTGGCTTTCCATATGAGGATGACATCTTGAACGCAATT
CAGCAGGCTCATGACGGGAAACCTGTGCCGAAGATCACCAAAGCCCGTGCACCATGCGTC
ATTATG
//
OMLM01020360.1:subseq(13285,58428)	GeneWise	match	50526	50000	142.21	-	.	OMLM01020360.1:subseq(13285,58428)-genewise-prediction-1
OMLM01020360.1:subseq(13285,58428)	GeneWise	cds	50526	50439	0.00	-	0	OMLM01020360.1:subseq(13285,58428)-genewise-prediction-1
OMLM01020360.1:subseq(13285,58428)	GeneWise	intron	50438	50303	0.00	-	.	OMLM01020360.1:subseq(13285,58428)-genewise-prediction-1
OMLM01020360.1:subseq(13285,58428)	GeneWise	cds	50302	50226	0.00	-	2	OMLM01020360.1:subseq(13285,58428)-genewise-prediction-1
OMLM01020360.1:subseq(13285,58428)	GeneWise	intron	50225	50081	0.00	-	.	OMLM01020360.1:subseq(13285,58428)-genewise-prediction-1
OMLM01020360.1:subseq(13285,58428)	GeneWise	cds	50080	50000	0.00	-	0	OMLM01020360.1:subseq(13285,58428)-genewise-prediction-1
//